CDS

Accession Number TCMCG006C77901
gbkey CDS
Protein Id XP_013696564.1
Location complement(join(16729876..16730265,16730514..16730617,16730684..16730726,16730802..16731075,16731158..16731248,16731606..16731680,16731862..16731958,16732063..16732213,16732304..16732499,16732809..16737576))
Gene LOC106400736
GeneID 106400736
Organism Brassica napus

Protein

Length 2062aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013841110.2
Definition uncharacterized protein At1g21580-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description zinc finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098787        [VIEW IN EMBL-EBI]
GO:0098789        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCATCTCATTACAAACCGAGTTATACCCAATGGAATTCTCCTTACTCTCCTCATCATCCTCCTGCTCCTCTCCTTCCGCCGCCGCCGCCTCCTCCTCCTCGCCAATCTCATCCCGATAGCCCTAATTTCTATGTTCCATCAAGTCATAACGGTGGGCAACGTCAGGATTACCATCACTACTCTCATCGCCAAGATCTTCCTCCTCCCAATCCGGCAGTTGATTATCCGTCTTCCTACTATCCTCACCATCCGCCGCCGCCGCCGCCGCCACAGCATCAACCATACATCCCTCAGCAAGTTAGCTATGAGTCTCAAAGGGCTTCGCAGCCTTCGTCTTCAACTATCCCATTCACGGAATCTCGAGATGTCTCTCAGTCTCCCTGGGTTGATTCATGGACAGACGCTGGTCCGGGGCGAATGTATACTGGTGGAAGCCGATTGGATCCGAGTCCGAGCCGTGACTATCGGTATGACTACAGCCGCTCGTCGAGGGATTCATCTGGTGTTATCAGCATCAACCGTGGTTTAGATGGTAGTTCTAGGTCTAGAGATGAGTTTCGTAATACTGGGTATGTGAGAAAAGAATCTAGAATAGAAGGGAGTTATCAAGACCGTGGTCAGTTAAATGCAGAGTCTGATAGGTGTTTTAGGGGTCTAGGTCAAGGTAATAGGAGTCTAGCTTCTCGTGTTGGTTATGGTACTGATCGATATGGTGTTTCAGTGAGTCGTGATATGGGTAGGTCTTCTGCAAGTCATGAAGGGACTAGAAACCAGAGGTGGGATGAAGGGAGGATTCTCTATCCCCGGAAAAAGGATGACTACTATCATTCCGAGACTGAACAATATTTTGATCGTGGAAGGAGAGCGGAGAGCAGTGAACTGAATCGAACTCCCAGGAAACAAATGCAGAAGAAGAGTGCTCTGCTTAGGCTTGAAACTCCAAGAAACCATCAGAAGGGTAGAGAGAATGGTCGGAATCATAGTAACTATAATGGGAAAAGATTTAACTCGAACTTGTTTAGGGGTAAAGAACATTTGGGTCGTTCTGATCGTGGATTGGTGGAGAAGCAAAGGGAGAGAACTCCAGTGGATCTTGATGTTTCATTTGAATCGAATCTTCTTGTAGCTAAGACCATAGCATCACCTGCCAGTGCAGGCATCCACCCAAGCCGGTCTGTGACACCTCGGTCTTTTAAAGCTAGAAGAGCATTGGTACCTGATAAAAGTGAGAACCCTTCTGTAACTGAAGGAAATGGAAAGTTGAGATTACAATTTTCAGATGAGGCTTCGGTTTCTGAAGGCTCCAGACCATCTAAAAGGCAAAATATTTCATCTGAAATTGAAAAGAAACCTGATAATTACTTAACCCCGTCTTCCAGTGATGCTGGGGGTATGAACAAGGTCAGCTTTGTTGACGGTGTCGTTCAGGATTGCGAAGTTAAAATCACTGATGGAGGTCCTGAAGCGTTAACTCGTGATAGTGAAGCAAAAGTTCGTAGTACTCTACATGCTGCAGAAAAGATCTCTAATTTTTGTGAGGCTTTGAAAGAGGCCAAGGATGACTCTAATGTCGAACGTGATAGCAATATGGAGGCTTGCTCCATTAAAGAAGATTTTATTGAAGGAGACAAAAGTATACTGAAGTCTCAAGATGTGCTGGACAGAACTGGTTGTAATACTGGTGAGGCTCTTCCGCTGAAGGTCATGGAGATGGAAGACATTGTGAAGGCGAGTACCAATAGGTCTCCTACTAAATTACTTGTACCATTGTCAACAGCCGCTGATATCTCTGAGTATTCTGAAGCAGTAATTGGTTTTTCTCGTAAGTCCATGTGTAGTGTTGAGTCTCATCCTTGCGAAGATGTGGATATGGATTGTTCATCATCAAGGAATGTACCAACAGAGGAGGTAAATACAGGGTTTGAAGAAAGTGCATTCATTGGCTCATCAGTTGGATCTTTAGGTTATGTGGATAAAGATTTGGAAAAGTCATCTCGAGACGCATCCATCTATTTTAATAGAGAAGACCCTGGTGATCAGGCGACGGGGAAGTTAGGTATTGGTAGTATTGAAGATGGTAGCAATGGGATCAGTAAGAATGTAGATTCCTTGTGTCCTGAAAATAACTGCCGTTGGGGTCTAGTTTCCTCTGCCTCTCTGGAAATTCCTAGTGTTTCAACGGAGCTTGCTAATGCAAATAATAATATTTCAGGGGATCTTGCTAATGCTCACAGTTTTACCATTGGTACATGTACCCATACCAATACCATAGTCGACTTACCTGATATGAGCGGAAGTAAAAATCCTACTCATTGTGAAAACACGGTCAACCCATCAGTTGAGAATGGTAGCAGAAAAAAATTTGTGGAAACTACGCCTCTCAGTAGTGTTGCAGAAATGGCTGATAATCTGAACAGTGATGAAGGTAAAAAAGCCTGTGTAAAAGGTACTTCTTCATCTCTTTCAGAGGTTGATGTAAAGGGATCATTAATTGTGTTGCCTGTTGAGAGAACTGAAGGCTATCCACGCAGTGATGAATCAGATTTAGCTATGGCAGTGTGTATGGAAAATGTAAGTGCCGAGAGACTTGCGCCTGATGAAGACCTTGGTTTAGCATCTCATCATCCTGCCGAGATTCCTTCTGTAGATCAGTTAAGTGGTTCAAATAATAGAAGTTTGAAAGCTTGTTTACCGGAGCCAAATGTTTCTCTGAACAAAGATATTACTGATGGTTCAAGCGTGGGGCTTGTTCAGCGAGACGTCAGCCAAAATGATTCCACTTTCTATGGTAATTTACCTTGCTCGCCTGCATTGGTAATTGAAACAAACATTGCAGTTGGAATTAATGGCATGTCTGCTAATGAATCTGTTACTAATGCTGAATCTGGTCTCCACGAAAGTCAACCATGCTCAACTGTAAGCAAGTTCTTACCTGAAGATCGTCGGGGATGTGGATCATCTGGTGCATTTGGTTCTGTCTGGAATCTCGCTGTGAAGAAAAATCTGGAAGAGGATCCTTCAAGGGTTAGTGCTTGCTTAGTATCTGATATTTCTCCCTTGATGGCAATGAATGAGCAGATACAAAACAAAGAATCTATTCAAACTAACTACAGTGCATCTCAAGGTGGCATCATGCATGAGGAAAATAATTTTGCTGAGAACATTGCTATAGATACTCAAGAAGAGAAGAAAACAAACCCTTCTGGTGGAAATTCGAAGTGCAGAACTCTGGAAACTGATATTGTTGTTGTTACTGGGAATTCAGTGTTGTCATGTAATTCTTTATCCAGCTCACCGGGGCAGAGCTTCGGGCAGATACCGAGTGAAACACATGTTGCTGCTACAGTTGATGAAACTTACAAAGATAAACAGAAATCCAAGCATTCTGGTGGTACAAGTGAGTACAGAACTCAAGGAGCTGATACTGTTGCTTTTTGTGGGGATTCAGTTCCATCTGATTCTCTATCCAACTCTCCAAAGCTGTTCAGACAGATACAGAGTGAAACTCATGTTGTTTCTATGGCTGATGACTCTAACAACTATAAAGAGAAAGCAAAGCCATCCGGTGAAACCTCTAAGTACAGAACTCCGGAAGCTGATGTAACATCTGATGTTGGCGGTCAAGAGAAATACTCACAGAACAGTATTAAGACTGATATATTTAATGGTGAAGCATTGTCAGCTGATCGAAAAGTTTCTGGAACTGAAATTCTTGGTGATTCAGGAGTTCATCTGTCATCACGTGCAGATGTTAAATTTGCATTGACCCATGTTAACGATCATGCAAAATCTGTGCCAGATCGGGATCCCCAGAATAAGACATCTTTGAGCTCTAGGTGTGAATTAGAAAAGAGGAAAAAGAAATCCAGTTACTCTACTCAGAAAAGTTATCCCCGTTCCCTGCCTTTTGTATCTGACACTAAGAAAAATGCTAACCCTCCCAATAAGCATCACACTTGGCATCGAAAGCCTAGTCCTGCTGCCTCTTCTTTTGTTGCTGCCAAGCCTTTATCGTCTACTTTTTCTACACAACAGAAGGTTCCCATAGTGACTGCCCAATCTAGTAATAGTTATGTACGTAAAGGGAATAGCCTTCTTCGAAAACCCTCGGATTCTCCTGGTGTTACCCTTGGACTGCCTTTATCTGCTATCCAGTTAAACCGTATAGAAAACAAAAGCACAGGATCTGCCAGTAGTGTTGATGTAGGTAACGCTTCTTTTCTTGTTAAAGCAGGAGAAATACCCACTCTTGTGAAGCAGTCAAAGCCTCCCTCAGACAGCAGCACCTCCAAAGTATCAAATGCCATTGGTGCTCCTTCAGGAAAACGTGCATTATCTTACAGCATGGATCACCCCACAACTTATTTACCTGAGTCTATCATGGATTCTGCTACATCTGGGGAAGCTAGTGCTCCGCACTCTGGTGGAGATACATCTAAGACATCTGACACGCCAATCCAGACAGATTATGCCTCAGATTGCCAGCAGAAGAAAATTCCTCCTAAATTGGATTCTTCAGATTTGAAGAGAACGGTATATGTTAAAAGGAAGGCAAATCAGTTGGTTGCAGCTTCAGATATTCATAGTACAAGTAGGAGCCAGATTCCTACCTCTGATGGCTACTTCAAGCGAAATAAAAATCAGCTAGTAAGGACTTCCGAGAGCCGTGTCAATTACTCACCTGATGATGCATTAGATTCACGAGCATCTGCAACCATGGTTTCGGAAAGAAGATCTTCTAGCTCAGCATTCTCCGACTCTGCTGTCACGAGACCATATAAGCGGTCAAAATTTTCTCTGGTTTGGTTGCAAGATGATCCACAGTCAGGGTTGCCCTCAAGTCACATGCGCTATCGGAGGATCTTGCCGCAACTTGTTCCTTGGAAAAGAGTGACATACTGGAGAAGATTAATGAATTCAGTCTCCGCTTTGCGAAATGGTTCTTTTCCCAACACCAGCCAAAAGTTGTCAACGATGAGGAAGAGACATACTGTATACACAAGATCAACTAACGGGTATTCACTTAGAAAATCCAAGGTCTTAAGTATTGGTGGGTCGCATTTAAAATGGTCCAAGTCCATTGAGAGAGACTCGAGAAAAGCTAATGAGGAAGCCACTTTGGCTGTGGCTGCATTTTCAAAGAAAGAAAATGAAAAGCATTCTGGACAAAGTAGTACTAGGAAGGCAAGCAGAAACCATCTGACACGGGAGCGCATTTTCAGGTTTGGTTCCCTTCGCTATAAAATGGACCCTTCAAGGCGAACTCTTCAGAGAATATCTGATGTTGATTCACCGTGCTCTGGACCTACTGAAAATGGAAAAGCCGCAAAAAGACCGTTCATCCCAAAGAGATTGGTCATAGGCCATGAAGAATATGTACGTGTTGGGAATGGTAACCAGCTTGTCAGAGATCCAAAGAAACGAACCCGTGCGTTGGCAAATGAGAAGGTCAGATGGAGCCTGCATAATGTTCGGTTGCGGTTGGCTAAGAAGAAGAAGAAGTACTGCCAGTTCTTCACAAGATTCGGGAAATGCAACAAAGATGACGGAAAATGTCCCTATGTTCATGACCCCTCGAAAATTGCAGTTTGCACCAAATTTTTGAATGGATTGTGTGCCAATGAAAATTGCAAATTGACTCACAAGGTCATTCCAGAAAGGATGCCCGATTGTTCTTATTTTCTGCAAGGGCTATGCAACAATGAGGCGTGTCCATACAGGCATGTGCATGTCAACCCCAGTGCTGCTATATGTGATGGGTTTTTAAAGGGATACTGTTCAGACGGAGACGAGTGTCGGAAGAAGCATTCCTACACCTGCCCAGATTTCGAAGCAACTGGATCATGCTCTCAAGGATCGAAATGCAAGCTCCACCACCCCAAGAACCAAGGCAAAGGAAGAAAGAGGAAAAGACCAAGCGAACCATCAGAGAAAAATGCCCGTGGGCGTTACTTTGGCTCACTTCAGAAACTCTTTTCCGAGTCTGAGCCAATGGTAGTGGATAGACATCCCACTGAGAGTGAAGATTTTGGAACAGAAGGCATTGAGTTTATATCACTTGGCGCTACTGAGGAAGAAGCCGGTGATAACAATGATCAAGCCAACGAGCAATCTATCTCCAGTGAGAGTGAAGAACCTGCTTCAATATACGAGCTAATCAGACCAGTAGCTTTGATGCGGTAA
Protein:  
MDSSHYKPSYTQWNSPYSPHHPPAPLLPPPPPPPPRQSHPDSPNFYVPSSHNGGQRQDYHHYSHRQDLPPPNPAVDYPSSYYPHHPPPPPPPQHQPYIPQQVSYESQRASQPSSSTIPFTESRDVSQSPWVDSWTDAGPGRMYTGGSRLDPSPSRDYRYDYSRSSRDSSGVISINRGLDGSSRSRDEFRNTGYVRKESRIEGSYQDRGQLNAESDRCFRGLGQGNRSLASRVGYGTDRYGVSVSRDMGRSSASHEGTRNQRWDEGRILYPRKKDDYYHSETEQYFDRGRRAESSELNRTPRKQMQKKSALLRLETPRNHQKGRENGRNHSNYNGKRFNSNLFRGKEHLGRSDRGLVEKQRERTPVDLDVSFESNLLVAKTIASPASAGIHPSRSVTPRSFKARRALVPDKSENPSVTEGNGKLRLQFSDEASVSEGSRPSKRQNISSEIEKKPDNYLTPSSSDAGGMNKVSFVDGVVQDCEVKITDGGPEALTRDSEAKVRSTLHAAEKISNFCEALKEAKDDSNVERDSNMEACSIKEDFIEGDKSILKSQDVLDRTGCNTGEALPLKVMEMEDIVKASTNRSPTKLLVPLSTAADISEYSEAVIGFSRKSMCSVESHPCEDVDMDCSSSRNVPTEEVNTGFEESAFIGSSVGSLGYVDKDLEKSSRDASIYFNREDPGDQATGKLGIGSIEDGSNGISKNVDSLCPENNCRWGLVSSASLEIPSVSTELANANNNISGDLANAHSFTIGTCTHTNTIVDLPDMSGSKNPTHCENTVNPSVENGSRKKFVETTPLSSVAEMADNLNSDEGKKACVKGTSSSLSEVDVKGSLIVLPVERTEGYPRSDESDLAMAVCMENVSAERLAPDEDLGLASHHPAEIPSVDQLSGSNNRSLKACLPEPNVSLNKDITDGSSVGLVQRDVSQNDSTFYGNLPCSPALVIETNIAVGINGMSANESVTNAESGLHESQPCSTVSKFLPEDRRGCGSSGAFGSVWNLAVKKNLEEDPSRVSACLVSDISPLMAMNEQIQNKESIQTNYSASQGGIMHEENNFAENIAIDTQEEKKTNPSGGNSKCRTLETDIVVVTGNSVLSCNSLSSSPGQSFGQIPSETHVAATVDETYKDKQKSKHSGGTSEYRTQGADTVAFCGDSVPSDSLSNSPKLFRQIQSETHVVSMADDSNNYKEKAKPSGETSKYRTPEADVTSDVGGQEKYSQNSIKTDIFNGEALSADRKVSGTEILGDSGVHLSSRADVKFALTHVNDHAKSVPDRDPQNKTSLSSRCELEKRKKKSSYSTQKSYPRSLPFVSDTKKNANPPNKHHTWHRKPSPAASSFVAAKPLSSTFSTQQKVPIVTAQSSNSYVRKGNSLLRKPSDSPGVTLGLPLSAIQLNRIENKSTGSASSVDVGNASFLVKAGEIPTLVKQSKPPSDSSTSKVSNAIGAPSGKRALSYSMDHPTTYLPESIMDSATSGEASAPHSGGDTSKTSDTPIQTDYASDCQQKKIPPKLDSSDLKRTVYVKRKANQLVAASDIHSTSRSQIPTSDGYFKRNKNQLVRTSESRVNYSPDDALDSRASATMVSERRSSSSAFSDSAVTRPYKRSKFSLVWLQDDPQSGLPSSHMRYRRILPQLVPWKRVTYWRRLMNSVSALRNGSFPNTSQKLSTMRKRHTVYTRSTNGYSLRKSKVLSIGGSHLKWSKSIERDSRKANEEATLAVAAFSKKENEKHSGQSSTRKASRNHLTRERIFRFGSLRYKMDPSRRTLQRISDVDSPCSGPTENGKAAKRPFIPKRLVIGHEEYVRVGNGNQLVRDPKKRTRALANEKVRWSLHNVRLRLAKKKKKYCQFFTRFGKCNKDDGKCPYVHDPSKIAVCTKFLNGLCANENCKLTHKVIPERMPDCSYFLQGLCNNEACPYRHVHVNPSAAICDGFLKGYCSDGDECRKKHSYTCPDFEATGSCSQGSKCKLHHPKNQGKGRKRKRPSEPSEKNARGRYFGSLQKLFSESEPMVVDRHPTESEDFGTEGIEFISLGATEEEAGDNNDQANEQSISSESEEPASIYELIRPVALMR